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Volume 2023
https://doi.org/10.59275/j.melba.2023-1e2g
17 papers

Shape-aware Segmentation of the Placenta in BOLD Fetal MRI Time Series
2023/12/08PIPPI 2022 special issue
S. Mazdak AbulnagaCSAIL/EECS, Massachusetts Institute of Technology, Cambridge, MA, USA
MGH/HST Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, MA, USA, Neel DeyCSAIL, Massachusetts Institute of Technology, Cambridge, MA, USA, Sean I. YoungMGH/HST Martinos Center for Biomedical Imaging, Harvard Medical School, Boston, MA, USA
CSAIL, Massachusetts Institute of Technology, Cambridge, MA, USA, Eileen PanCSAIL/EECS, Massachusetts Institute of Technology, Cambridge, MA, USA, Katherine I. HobgoodCSAIL, Massachusetts Institute of Technology, Cambridge, MA, USA, Clinton J. WangCSAIL/EECS, Massachusetts Institute of Technology, Cambridge, MA, USA, P. Ellen GrantFetal-Neonatal Neuroimaging and Developmental Science Center, Boston Children’s Hospital, Harvard Medical School, Boston, MA, USA, Esra Abaci TurkFetal-Neonatal Neuroimaging and Developmental Science Center, Boston Children’s Hospital, Harvard Medical School, Boston, MA, USA, Polina GollandCSAIL/EECS, Massachusetts Institute of Technology, Cambridge, MA, USA

A Recycling Training Strategy for Medical Image Segmentation with Diffusion Denoising Models
2023/12/07Special Issue for Generative Models
Yunguan FuUniversity College London, UK
InstaDeep, UK, Yiwen LiUniversity of Oxford, UK, Shaheer U. SaeedUniversity College London, UK, Matthew J. ClarksonUniversity College London, UK, Yipeng HuUniversity College London, UK

PIPPI 2022 special issue
Paula RamirezBiomedical Engineering and Imaging Sciences, King's College London, Alena UusBiomedical Engineering and Imaging Sciences, King's College London, Milou P.M. van PoppelBiomedical Engineering and Imaging Sciences, King's College London, Irina GrigorescuBiomedical Engineering and Imaging Sciences, King's College London, Johannes K. SteinwegBiomedical Engineering and Imaging Sciences, King's College London, David F.A. LloydBiomedical Engineering and Imaging Sciences, King's College London, Kuberan PushparajahBiomedical Engineering and Imaging Sciences, King's College London, Andrew P. KingBiomedical Engineering and Imaging Sciences, King's College London, Maria DeprezBiomedical Engineering and Imaging Sciences, King's College London

Towards Early Prediction of Human iPSC Reprogramming Success
2023/11/10October 2023 issue
Abhineet SinghDepartment of Computing Science, University of Alberta, Ila JasraAlberta Diabetes Institute, University of Alberta, Omar MouhammedAlberta Diabetes Institute, University of Alberta, Nidheesh DadheechAlberta Diabetes Institute, University of Alberta, Nilanjan RayDepartment of Computing Science, University of Alberta, James ShapiroAlberta Diabetes Institute, University of Alberta

Morphologically-Aware Consensus Computation via Heuristics-based IterATive Optimization (MACCHIatO)
2023/09/14UNSURE2022 special issue
Dimitri HamzaouiUniversité Côte d’Azur, Inria, Epione Team, Sophia Antipolis, France, Sarah MontagneAcademic Department of Radiology, Hôpital Pitié-Salpétrière, Assistance Publique des Hôpitaux de Paris, Paris, France, Raphaële Renard-PennaAcademic Department of Radiology, Hôpital Pitié-Salpétrière, Assistance Publique des Hôpitaux de Paris, Paris, France
GRC 5 Predictive Onco-Urology, Sorbonne University, Paris, France, Nicholas AyacheUniversité Côte d’Azur, Inria, Epione Team, Sophia Antipolis, France, Hervé DelingetteUniversité Côte d’Azur, Inria, Epione Team, Sophia Antipolis, France

MLCN 2022 special issue
Amirhossein RasoulianDepartment of Computer Science and Software Engineering, Concordia University, Montreal, QC, Canada, Soorena SalariDepartment of Computer Science and Software Engineering, Concordia University, Montreal, QC, Canada, Yiming XiaoDepartment of Computer Science and Software Engineering, Concordia University, Montreal, QC, Canada

June 2023 issue
Mara GrazianiUniversity of Applied Sciences Western Switzerland (HES-SO Valais), 3960, Sierre, Switzerland
University of Geneva (UNIGE), Department of Computer Science (CUI), 1227, Carouge, Switzerland, Sebastian OtáloraUniversity of Applied Sciences Western Switzerland (HES-SO Valais), 3960, Sierre, Switzerland
University of Geneva (UNIGE), Department of Computer Science (CUI), 1227, Carouge, Switzerland, Stéphane Marchand-MailletUniversity of Applied Sciences Western Switzerland (HES-SO Valais), 3960, Sierre, Switzerland, Henning MüllerUniversity of Applied Sciences Western Switzerland (HES-SO Valais), 3960, Sierre, Switzerland
University of Geneva (UNIGE), Department of Computer Science (CUI), 1227, Carouge, Switzerland, Vincent AndrearczykUniversity of Applied Sciences Western Switzerland (HES-SO Valais), 3960, Sierre, Switzerland

Bayesian Optimization of Sampling Densities in MRI
2023/06/15June 2023 issue
Alban GossardInstitut de Mathématiques de Toulouse (IMT); UMR5219; Université de Toulouse; CNRS, France
Université Paul Sabatier, F-31062 Toulouse Cedex 9, France, Frédéric de GournayInstitut de Mathématiques de Toulouse (IMT); UMR5219; Université de Toulouse; CNRS, France
INSA de Toulouse; F-31077 Toulouse, France, Pierre WeissInstitut de Mathématiques de Toulouse (IMT); UMR5219; Université de Toulouse; CNRS, France
Université de Toulouse, CNRS
Centre de Biologie Intégrative (CBI), Laboratoire MCD, F-31062 Toulouse Cedex, France

Pathology Synthesis of 3D-Consistent Cardiac MR Images using 2D VAEs and GANs
2023/06/08June 2023 issue
Sina AmirrajabDepartment of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands, Yasmina Al KhalilDepartment of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands, Cristian LorenzPhilips Research Laboratories, Hamburg, Germany, Jürgen WeesePhilips Research Laboratories, Hamburg, Germany, Josien PluimDepartment of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands, Marcel BreeuwerDepartment of Biomedical Engineering, Eindhoven University of Technology, Eindhoven, The Netherlands
Philips Healthcare, MR R&D - Clinical Science, Best, The Netherlands

May 2023 issue
Farnaz Khun JushTechnology Excellence, Siemens Healthcare GmbH, Erlangen, Germany
Pattern Recognition Lab, Friedrich-Alexander-University, Erlangen, Germany, Markus BieleTechnology Excellence, Siemens Healthcare GmbH, Erlangen, Germany, Peter M. DueppenbeckerTechnology Excellence, Siemens Healthcare GmbH, Erlangen, Germany, Andreas MaierPattern Recognition Lab, Friedrich-Alexander-University, Erlangen, Germany

May 2023 issue
Florian KoflerDepartment of Informatics, Technical University Munich, GermanyFlorian KoflerDepartment of Informatics, Technical University Munich, Germany
TranslaTUM - Central Institute for Translational Cancer Research, Technical University of Munich, Germany
Department of Diagnostic and Interventional Neuroradiology, School of Medicine, Klinikumrechts der Isar, Technical University of Munich, Germany
Helmholtz AI, Helmholtz Zentrum München, Germany et al.
TranslaTUM - Central Institute for Translational Cancer Research, Technical University of Munich, Germany
Department of Diagnostic and Interventional Neuroradiology, School of Medicine, Klinikumrechts der Isar, Technical University of Munich, Germany
Helmholtz AI, Helmholtz Zentrum München, Germany, Ivan EzhovDepartment of Informatics, Technical University Munich, Germany
TranslaTUM - Central Institute for Translational Cancer Research, Technical University of Munich, Germany, Fabian IsenseeApplied Computer Vision Lab, Helmholtz Imaging, Germany
Division of Medical Image Computing, German Cancer Research Center (DKFZ), Germany, Fabian BalsigerSupport Center for Advanced Neuroimaging (SCAN), Institute for Diagnostic and Interventional Neuroradiology, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland, Christoph BergerDepartment of Informatics, Technical University Munich, Germany, Maximilian KoernerDepartment of Informatics, Technical University Munich, Germany, Beatrice DemirayComputer Aided Medical Procedures (CAMP), Technical University of Munich, Germany, Julia RackersederComputer Aided Medical Procedures (CAMP), Technical University of Munich, Germany
ImFusion GmbH, Munich, Germany, Johannes PaetzoldDepartment of Informatics, Technical University Munich, Germany
Helmholtz Zentrum München, Germany
Imperial College London, Hongwei LiDepartment of Informatics, Technical University Munich, Germany
Department of Quantitative Biomedicine, University of Zurich, Switzerland, Suprosanna ShitDepartment of Informatics, Technical University Munich, Germany
TranslaTUM - Central Institute for Translational Cancer Research, Technical University of Munich, Germany, Richard McKinleySupport Center for Advanced Neuroimaging (SCAN), Institute for Diagnostic and Interventional Neuroradiology, Inselspital, Bern University Hospital, University of Bern, Bern, Switzerland, Marie PiraudHelmholtz AI, Helmholtz Zentrum München, Germany, Spyridon BakasCenter for Biomedical Image Computing and Analytics (CBICA), University of Pennsylvania, Philadelphia, Pennsylvania, USA
Department of Pathology and Laboratory Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA
Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA, Claus ZimmerDepartment of Diagnostic and Interventional Neuroradiology, School of Medicine, Klinikumrechts der Isar, Technical University of Munich, Germany, Nassir NavabComputer Aided Medical Procedures (CAMP), Technical University of Munich, Germany, Jan KirschkeDepartment of Diagnostic and Interventional Neuroradiology, School of Medicine, Klinikumrechts der Isar, Technical University of Munich, Germany, Benedikt WiestlerTranslaTUM - Central Institute for Translational Cancer Research, Technical University of Munich, Germany
Department of Diagnostic and Interventional Neuroradiology, School of Medicine, Klinikumrechts der Isar, Technical University of Munich, Germany
contributed equally as senior authors, Bjoern MenzeDepartment of Informatics, Technical University Munich, Germany
Department of Quantitative Biomedicine, University of Zurich, Switzerland
contributed equally as senior authors

Effect of latent space distribution on the segmentation of images with multiple annotations
2023/04/30UNSURE2022 special issue
Ishaan BhatImage Sciences Institute, University Medical Center Utrecht, The Netherlands, Josien P.W. PluimDepartment of Biomedical Engineering, Eindhoven University of Technology, The Netherlands, Max A. ViergeverImage Sciences Institute, University Medical Center Utrecht, The Netherlands, Hugo J. KuijfImage Sciences Institute, University Medical Center Utrecht, The Netherlands

Multi-Scale Feature Fusion using Parallel-Attention Block for COVID-19 Chest X-ray Diagnosis
2023/04/26April 2023 issue
Xiao QiDepartment of Electrical and Computer Engineering, Rutgers Univeristy, New Brunswick, NJ, USA, David J. ForanRutgers Cancer Institute of New Jersey, New Brunswick, NJ, USA, John L. NosherDepartment of Radiology, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ, USA, Ilker HacihalilogluDepartment of Radiology, The University of British Columbia, BC, Canada
Department of Medicine, The University of British Columbia, BC, Canada

Cross Attention Transformers for Multi-modal Unsupervised Whole-Body PET Anomaly Detection
2023/04/19April 2023 issue
Ashay PatelKing’s College London, Petru-Danial TudiosuKing’s College London, Walter H.L. PinayaKing’s College London, Gary CookKing’s College London, Vicky GohKing’s College London, Sebastien OurselinKing’s College London, M. Jorge CardosoKing’s College London

March 2023 issue
Jérôme RonyLIVIA, Dept. of Systems Engineering, École de technologie supérieure, Montreal, Canada, Soufiane BelharbiLIVIA, Dept. of Systems Engineering, École de technologie supérieure, Montreal, Canada, Jose DolzLIVIA, Dept. of Software and IT Engineering, École de technologie supérieure, Montreal, Canada, Ismail Ben AyedLIVIA, Dept. of Systems Engineering, École de technologie supérieure, Montreal, Canada, Luke McCaffreyGoodman Cancer Research Centre, Dept. of Oncology, McGill University, Montreal, Canada, Eric GrangerLIVIA, Dept. of Systems Engineering, École de technologie supérieure, Montreal, Canada

Focused Decoding Enables 3D Anatomical Detection by Transformers
2023/02/27February 2023 issue
Bastian WittmannDepartment of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland, Fernando NavarroDepartment of Informatics, Technical University of Munich, Munich, Germany, Suprosanna ShitDepartment of Informatics, Technical University of Munich, Munich, Germany, Bjoern MenzeDepartment of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland

Automated Cardiac Resting Phase Detection Targeted on the Right Coronary Artery
2023/02/03January 2023 issue
Seung Su YoonPattern Recognition Lab, Friedrich-Alexander-Universität Erlangen-NürnbergSeung Su YoonPattern Recognition Lab, Friedrich-Alexander-Universität Erlangen-Nürnberg
Magnetic Resonance, Siemens Healthcare GmbH et al.
Magnetic Resonance, Siemens Healthcare GmbH, Elisabeth PreuhsPattern Recognition Lab, Friedrich-Alexander-Universität Erlangen-Nürnberg, Michaela SchmidtMagnetic Resonance, Siemens Healthcare GmbH, Christoph FormanMagnetic Resonance, Siemens Healthcare GmbH, Teodora ChitiboiSiemens Medical Solutions USA, Puneet SharmaSiemens Medical Solutions USA, Juliano L. FernandesJose Michel Kalaf Research Institute, Christoph TillmannsDiagnostikum Berlin, Jens WetzlMagnetic Resonance, Siemens Healthcare GmbH, Andreas MaierPattern Recognition Lab, Friedrich-Alexander-Universität Erlangen-Nürnberg